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Aïda Ouangraoua

Professeure, Faculté des sciences
FAC. SCIENCES Informatique

Présentation

Sujet de recherche

Bioinformatics, Algorithms, Data mining

Disciplines de recherche

Computer Science, Biology and Related Sciences

Mots-clés

Algorithms, Computational Genomics, Data science, non-coding RNA structure, Alternative splicing, RNA bioinformatics

Intérêts de recherche

Models and algorithms for the analysis of gene splicing structures and non-coding RNA structures.

Langues parlées et écrites

Anglais, Français

Diplômes

(2009). (Post-doctorate, Post-doctorate). Université du Québec à Montréal.

(2009). (Post-doctorate, Post-doctorate). Simon Fraser University.

(2007). (Doctorate, Doctorate). Université de Bordeaux I.

(2004). (Master's Thesis, Master's Thesis). Université de Bordeaux I.

(2004). (Master's non-Thesis, Engineering diploma).

Titres de compétence

(2004) Computer science engineer (2004) - Member of the order OIQ --Ordre des Ingénieurs du Québec-- as junior engineer (2014).

Expérience académique

Professor. (2014-). Séminaire de Sherbrooke. Canada.

Researcher. (2009-2014). Institut National de Recherche en Informatique et Automatique. France.

Prix et distinctions

  • (2025) CRC Tier 2 renewal. Canada Research Chairs (CRC). (Distinction).
  • (2020) CRC Tier 2. Canada Research Chairs (CRC). (Distinction).
  • (2019) New university researchers start up grant. Fonds de recherche du Québec - Nature et technologies (FRQNT). (Distinction).

Financement

  • Research Chair. (Awarded). Principal Applicant. Biological and computational complexity. Canada Research Chairs (CRC). CRC Tier 2. 500 000 $. (2021-2025)
  • Grant. (Awarded). Principal Investigator. Structure-aware models and algorithms for reconstructing the evolution and ancestral states of genes and genomes. Natural Sciences and Engineering Research Council of Canada (NSERC). Discovery grants program. 120 000 $. (2017-2022)
  • Research Chair. (Completed). Principal Applicant. Biological and computational complexity. Canada Research Chairs (CRC). CRC Tier 2. 540 000 $. (2015-2020)
  • Grant. (Completed). Principal Applicant. Visualization of gene structures, phylogenetic trees, and RNA structures. Mathematics of Information Technology and Complex Systems (MITACS). Acceleration. 80 000 $. (2018-2020)
  • Grant. (Completed). Principal Applicant. Models and algorithms for efficient homology search, classification and structure prediction of non-coding RNAs. Fonds Québécois de la Recherche sur la Nature et les Technologies (FQRNT). New university researchers start up program. 60 000 $. (2017-2019)

Publications

Articles de revue

  • Safa Jammali*, Abigaïl Djossou*, Wend-Yam D D Ouédraogo*, Yannis Nevers, Ibrahim Chegrane*, Aïda Ouangraoua. (2022). From pairwise to multiple spliced alignment. Bioinformatics Advances 2 (1), vbab044. (Published).
  • Anaïs Vannutelli*, Jean-Pierre Perreault, Aïda Ouangraoua. (2022). G-quadruplex occurrence and conservation: more than just a question of guanine–cytosine content. NAR Genomics and Bioinformatics 4 (1), lqac010. (Published).
  • Anais Vannutelli*, Lauriane Schell*, Jean-Pierre Perreault, Aida Ouangraoua. (2022). GAIA: G-quAdruplexes In Alive creature database. Nucleic Acid Research gkac657. (Accepted).
  • E. Kuitche*, Y. Qi*, N. Tahiri, J. Parmer, A. Ouangraoua. (2021). DoubleRecViz: A Web-Based Tool for Visualizing Transcript-Gene-Species tree reconciliation. Bioinformatics 37 (13), 1920–1922. DOI. (Published).
  • Esaie Kuitche*, Yanchun Qi*, Nadia Tahiri, Jack Parmer, Aïda Ouangraoua. (2021). DoubleRecViz: a web-based tool for visualizing transcript–gene–species tree reconciliation. Bioinformatics 37 (13), 1920–1922. (Published).
  • Yoann Anselmetti*, Nadia El-Mabrouk, Manuel Lafond, Aïda Ouangraoua. (2021). Gene tree and species tree reconciliation with endosymbiotic gene transfer. Bioinformatics 37 (1), i120–i132. (Published).
  • Marie A Brunet, Jean-François Lucier, Maxime Levesque, Sébastien Leblanc, Jean-Francois Jacques, Hassan R H Al-Saedi, Noé Guilloy, Frederic Grenier, Mariano Avino, Isabelle Fournier, Michel Salzet, Aïda Ouangraoua, Michelle S Scott, François-Michel Boisvert, Xavier Roucou. (2021). OpenProt 2021: deeper functional annotation of the coding potential of eukaryotic genomes. Nucleic acid research 49 (D1), D380–D388. (Published).
  • N. Da Rocha Coimbra*, A. Góes-Neto, V. Azevedo, A. Ouangraoua. (2020). CorynebacterialesReconstructing the phylogeny of while accounting for horizontal gene transfer. Genome Biology and Evolution 12 (4), 381-395. DOI. (Published).
  • A. Vannutelli*, S. Belhamiti*, J-M. Garant, A. Ouangraoua, and J-P. Perreault. (2020). Where are G-quadruplexes located in the human transcriptome?. NAR Genomics and Bioinformatics 2 (2), lqaa035. DOI. (Published).
  • M-A. Bossanyi*, V. Carpentier*, J-P. Glouzon, A. Ouangraoua, Y. Anselmetti*. (2020). aliFreeFoldMulti: alignment-free method to predict secondary structures of multiple RNA homologs. NAR Genomics and Bioinformatics 2 (4), lqaa086. DOI. (Published).
  • M. A. Brunet, M. Brunelle, J-F. Lucier, V. Delcourt, M. Levesque, F. Grenier, S. Samandi, S. Leblanc, J-D. Aguilar*, P. Dufour, J-F. Jacques, I. Fournier, A. Ouangraoua, M.S. Scott, F-M. Boivert, X. Roucou. (2019). OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes. Nucleic Acids Research 47 (Database), 403-410. DOI. (Published).
  • E. Kuitche*, S. Jammali*, A. Ouangraoua. (2019). SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution. BMC bioinformatics 20 (20), 640. DOI. (Published).
  • S. Jammali*, J-D. Aguilar*, E. Kuitche*, A. Ouangraoua. (2019). SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups. BMC Bioinformatics 20 (S3), 37-52. DOI. (Published).
  • N. Luhmann, M. Lafond, A. Thévenin, A. Ouangraoua, R. Wittler, C. Chauve. (2019). The SCJ Small Parsimony Problem for Weighted Gene Adjacencies. IEEE/ACM Transactions on Computational Biology and Bioinformatics 16 (4), 1364-1373. DOI. (Published).
  • M. Lafond M, C. Chauve, N. El-Mabrouk, A. Ouangraoua. (2018). Gene Tree Construction and Correction using SuperTree and Reconciliation. IEEE/ACM Transactions on Computational Biology and Bioinformatics (Special issue of conference APBC 2017) 15 (5), 1560-1570. DOI. (Published).
  • J-P. S. Glouzon*, A. Ouangraoua. (2018). aliFreeFold: an alignment-free approach to predict secondary structure from homologous RNA sequences. Bioinformatics (Proceedings of ISMB 2018) 34 (13), i70-i78. DOI. (Published).
  • S. Samandi, A. V. Roy, V. Delcourt, J-F. Lucier, J. Gagnon, M. C. Beaudoin, B. Vanderperre, M.-A. Breton, J. Motard, J–F. Jacques, M. Brunelle, I. Gagnon-Arsenault, I. Fournier, A. Ouangraoua, D.J. Hunting, A.A. Cohen, C.R. Landry, M.S. Scott, X. Roucou. (2017). Deep transcriptome annotation enables the discovery and functional characterization of cryptic small proteins. Elife 6 e27860. DOI. (Published).
  • E. Kuitche*, M. Lafond, A. Ouangraoua A. (2017). Reconstructing protein and gene phylogenies using reconciliation and soft-clustering. Journal of Bioinformatics and Computational Biology 15 (6), 1-25. DOI. (Published).
  • S. Jammali*, E. Kuitche*, A. Rachati*, F. Bélanger*, M. Scott, A. Ouangraoua. (2016). Aligning coding sequences with frameshift extension penalties. Algorithms for Molecular Biology 12 (1), 1-18. DOI. (Published).
  • Perrin A*, Varré J-S, Blanquart , Ouangraoua A. (2015). ProCARs: Progressive Reconstruction of Ancestral Gene Orders. BMC Genomics (Special issue of conference ISCB-LA 2014) 16(Suppl 5) (S6), (Published).
  • Lafond M*, Ouangraoua A, El-Mabrouk N. (2015). Reconstructing a SuperGeneTree Minimizing Reconciliation. BMC Bioinformatics (Special issue of conference Recomb-CG 2015) 16(Suppl 14) S4. (Published).
  • Lavoie-Mongrain P*, Belcaid M, Ouangraoua A, Bergeron A, Poisson G. (2015). Reconstructing the history of a WD40 beta-propeller tandem repeat using a phylogenetically informed algorithm. PeerJ Computer Science 1 (e6), (Published).
  • Ouangraoua A , Raffinot M. (2014). On the Identification of Conflicting Contiguities in Ancestral Genome Reconstruction. Journal of Computational Biology 21 (1), 64--79. (Published).
  • Allali J , Saule C , Chauve C , d'Aubenton-Carafa Y , Denise A , Drevet C , Ferraro P , Gautheret D , Herrbach C , Leclerc F , de Monte A , Ouangraoua A , Sagot MF , Termier M , Thermes C , Touzet H. (2012). BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. Advances in bioinformatics 2012 893048. (Published).
  • Ouangraoua A , Swenson KM , Chauve C. (2011). A 2-Approximation for the Minimum Duplication Speciation Problem. Journal of Computational Biology 18 (9), 1041--1053. (Published).
  • Ouangraoua A , Guignon V , Hamel S , Chauve C. (2011). A new algorithm for aligning nested arc-annotated sequences under arbitrary weight schemes. Theoretical Computer Science 412 (8-10), 753--764. (Published).
  • Thomas A* , Varré JS , Ouangraoua A. (2011). Genome dedoubling by DCJ and reversal. BMC bioinformatics (Special issue of conference Recomb-CG 2011) 12 Suppl 9 S20. (Published).
  • Ouangraoua A , Tannier E , Chauve C. (2011). Reconstructing the architecture of the ancestral amniote genome. Bioinformatics 27 (19), 2664--2671. (Published).
  • Ouangraoua A , Bergeron A , Swenson KM. (2011). Theory and Practice of Ultra-Perfection. Journal of Computational Biology 18 (9), 1219--1230. (Published).
  • Ouangraoua A , Bergeron A. (2010). Combinatorial Structure of Genome Rearrangements Scenarios. Journal of Computational Biology 17 (9), 1129--1144. (Published).
  • Chauve C , Gavranovic H , Ouangraoua A , Tannier E. (2010). Yeast ancestral genome reconstructions: the possibilities of computational methods II. Journal of computational biology 17 (9), 1097-112. (Published).
  • Ouangraoua A , Ferraro P. (2009). A constrained edit distance algorithm between semi-ordered trees. Theoretical Computer Science 410 (8-10), 837--846. (Published).
  • Ouangraoua A , Ferraro P. (2009). A new constrained edit distance between quotiented ordered trees. Journal of Discrete Algorithms 7 (1), 78--89. (Published).
  • Segura V , Ouangraoua A , Ferraro P , Costes E. (2008). Comparison of tree architecture using tree edit distances: application to two-year-old apple tree. Euphytica 161 (1-2), 55-164. (Published).
  • Ouangraoua A , Ferraro P , Tichit L , Dulucq S. (2007). Local similarity between quotiented ordered trees. J. Discrete Algorithms 5 (1), 23--35. (Published).

Livres

  • M. Blanchette and A. Ouangraoua (Eds). (2018). Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018. (LNCS, 11183). Springer. (Published).

Rapports

  • Esaie Kuitche Kamela*, Marie Degen*, Shengrui Wang, Aïda Ouangraoua. (2020). Choosing representative proteins based on splicing structure similarity improves the accuracy of gene tree reconstruction. bioRXiv doi:10.1101/2020.04.09.034785. Université de Sherbrooke. 26 p.
  • Kuitche E*, Ouangraoua A. (2016). Reconstructing protein and gene phylogenies by extending the framework of reconciliation. Université de Sherbrooke. 10 p.
  • Bélanger F*, Ouangraoua A. (2015). Alignment of protein-coding sequences with frameshift extension penalties. arXiv:1508.04783 [cs.DS]. Université de Sherbrooke. 19 p.

Articles de conférence

  • Ibrahim Chegrane*, Nabil Benjaa* and Aïda Ouangraoua. (2022). Feature and model selection for non-coding RNA classification. Intelligent Systems for Molecular Biology (ISMB) 2022. (Published).
  • Wend Yam Donald Davy Ouédraogo*, Abigail Djossou* and Aida Ouangraoua. (2022). TranscriptDB : A transcript-centric database to study transcript conservation and evolution within gene trees. Intelligent Systems for Molecular Biology (ISMB) 2022. (Published).
  • Marc-André Bossanyi*, Yoann Anselmetti* and Aida Ouangraoua. (2021). An alignment-free method to predict the secondary structure of homologous RNA sequences. Great Lakes Bioinformatics conference (GLBIO) 2021. (Published).
  • Anais Vannutelli*, Aida Ouangraoua, Jean-Pierre Perreault. (2021). G-Quadruplexes prediction and conservation does not only depend on GC content. Riboclub annual meeting 2021. (Published).
  • Anais Vannutelli*, Aida Ouangraoua, Jean-Pierre Perreault. (2021). G4 conservation and abundances among all living kingdom. Pacifichem 2021. (Published).
  • Safa Jammali*, Abigail Djossou* and A. Ouangraoua. (2021). Multiple Spliced Alignment for Transcript Evolution Estimation and Gene Models Prediction. RECOMB Comparative Genomics (RECOMB-CG) 2021. (Published).
  • Abigail Djossou*, Safa Jammali* and Aida Ouangraoua. (2021). Multiple spliced alignment for reconstructing the evolution of alternative transcripts. Great Lakes Bioinformatics conference (GLBIO) 2021. (Published).
  • Esaie Kuitche Kamela*, Wend-Yam D. Davy Ouédraogo*, Marie Degen*, Shengrui Wang and Aida Ouangraoua. (2020). Splicing-structure-based selection of protein isoforms improves the accuracy of gene tree reconstruction. Intelligent Systems for Molecular Biology (ISMB) 2020. (Published).
  • Marc-André Bossanyi*, Valentin Carpentier*, Jean-Pierre Glouzon, Aida Ouangraoua and Yoann Anselmetti*. (2020). aliFreeFoldMulti: An alignment-free approach to infer secondary structure of homologous RNA sequences. Intelligent Systems for Molecular Biology (ISMB) 2020. (Published).
  • Esaie Kuitche*, Safa Jammali*, Aida Ouangraoua. (2019). Alternative splicing-aware simulation of biological sequence evolution. RECOMB Comparative Genomics (RECOMB-CG) 2019. (Published).
  • Anaïs Vannutelli*, Jean-Michel Garant, Aïda Ouangraoua and Jean-Pierre Perreault. (2019). G-quadruplexes evolution in transcriptome. Intelligent Systems for Molecular Biology (ISMB) 2019. (Published).
  • Esaie Kuitche Kamela*, Marie Degen*, Safa Jammali* and Aida Ouangraoua. (2019). Gene tree and transcript tree construction using splicing orthology groups. Intelligent Systems for Molecular Biology (ISMB) 2019. (Published).
  • Safa Jammali*, Samuel Whittom*, Esaie Kuitche*, A. Ouangraoua. (2019). Multiple spliced alignment and visualization of gene structure alignment. Asia Pacific Bioinformatics Conference (APBC) 2019. (Published).
  • Nilson Da Rocha Coimbra*, Aristóteles Góes-Neto, Vasco Azevedo and Aida Ouangraoua. (2019). Reconstructing the phylogeny of Corynebacteriales while accounting for Horizontal Gene Transfer. 4th Brazil Student Council Symposium (BR-SCS) 2019. (Published).
  • Nilson Da Rocha Coimbra*, Aristóteles Góes-Neto, Vasco Azevedo and Aida Ouangraoua. (2019). Reconstructing the phylogeny of Corynebacteriales while accounting for Horizontal Gene Transfer. Intellligent Systems for Molecular Biology (ISMB) 2019. (Published).
  • Safa Jammali*, Esaie Kuitche*, Aida Ouangraoua. (2019). SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups. Asia Pacific Bioinformatics Conference (APBC) 2019. (Published).
  • Safa Jammali*, Esaie Kuitche Kamela* and Aida Ouangraoua. (2019). Spliced alignment for the reconstruction of gene and transcript evolution. Intelligent Systems for Molecular Biology (ISMB) 2019. (Published).
  • Valentin Carpentier*, Ali Fotouhi, Jean-Pierre Glouzon*, A. Ouangraoua. (2018). An alignment-free approach to predict secondary structures of homologous RNA sequences. Riboclub Annual Meeting 2018. (Published).
  • Esaie Kuitche*, Marie Degen*, Safa Jammali, Aida Ouangraoua. (2018). Gene tree and transcript tree construction using splicing orthology groups. Riboclub Annual Meeting 2018. (Published).
  • Anna Thibert, Emmanuel Noutahi, Aida Ouangraoua and Nadia El-Mabrouk. (2018). LabelGTC : A general framework for gene tree correction. Intelligent Systems for Molecular Biology (ISMB) 2018. (Published).
  • Safa Jammali*, Samuel Whittom*, Esaie Kuitche*, Aida Ouangraoua. (2018). Multiple spliced alignment and visualization of gene structure alignment. Riboclub Annual Meeting 2018. (Published).
  • Nilson Da Rocha Coimbra*, Aristoteles Goes, Vasco Azevedo and Aida Ouangraoua. (2018). Reconstructing the phylogeny of Corynebacteriales while accounting for Horizontal Gene Transfer. Latin American Student Council Symposium (LA-SCS) 2018. (Published).
  • Safa Jammali*, Samuel Whittom, Esaie Kuitche*, Aida Ouangraoua. (2018). Visualization of gene structure based on multiple spliced alignment. RECOMB Comparative Genomics (RECOMB-CG) 2018. (Published).
  • Jean-Pierre Glouzon*, Aida Ouangraoua. (2018). aliFreeFold: an alignment-free approach to predict secondary structure from homologous RNA sequences. Intelligent Systems for Molecular Biology (ISMB) 2018. (Published).
  • Nadia El-Mabrouk, Aida Ouangraoua. (2017). A General Framework for Gene Tree Correction Based on Duplication-Loss Reconciliation. International Workshop on Algorithms in Bioinformatics (WABI) 2017. (Published).
  • El-Mabrouk N, Ouangraoua A. (2017). A general framework for genetree correction based on duplication-loss reconciliation. LIPICS 88, 8:1-8:14. (Published).
  • Manuel Lafond, Cedric Chauve, Nadia El-Mabrouk, Aida Ouangraoua. (2017). Gene Tree Construction and Correction Using SuperTree and Reconciliation. Asia Pacific Bioinformatics Conference (APBC) 2017. (Published).
  • Sarah Belhamiti*, Jean-Michel Garant, Aida Ouangraoua, Jean-Pierre Perreault. (2017). Identification and characterization of G-quadruplexes in human transcriptome. Riboclub Annual Meeting 2017. (Published).
  • Esaie Kuitche*, Manuel Lafond, Aida Ouangraoua. (2017). Reconstructing protein and gene phylogenies by extending the framework of reconciliation. International conference on Bioinformatics and Computational Biology (BICOB) 2017. (Published).
  • Kuitche E*, Ouangraoua A. (2017). Reconstructing protein and gene phylogenies by extending the framework of reconciliation. ISBN:9781510836679, 79-86. (Published).
  • Samuel Whittom*, Jean-David Aguilar*, Safa Jammali*, Esaie Kuitche*, Aida Ouangraoua. (2017). SpliceViz: A new Tool for simultaneous and interactive visualization of the Splice variants of multiple homologous genes. Riboclub Annual Meeting 2017. (Published).
  • Safa Jammali*, Esaie Kuitche*, Ayoub Rachati*, François Bélanger*, Aida Ouangraoua. (2016). Aligning coding sequences with frameshift extension penalties. RECOMB Comparative Genomics (RECOMB-CG 2016). (Published).
  • Nilson Da Rocha Coimbra*, Vasco Azevedo, Aida Ouangraoua. (2016). Highly resolved phylogeny for Corynebacteriales. ISCB-Latin America (ISCB-LA 2016). (Accepted).
  • Esaie Kuitche*, Manuel Lafond, Aida Ouangraoua. (2016). Reconstructing protein and gene phylogenies by extending the framework of reconciliation. Annual Rocky Mountain Bioinformatics Conference 2016. (Published).
  • Luhmann N, Thevenin A, Ouangraoua A, Wittler R, Chauve C. (2016). The SCJ small parsimony problem for weighted gene adjacencies. LNCS 9683, 200-210. (Published).
  • Ouangraoua A. (2013). Progressive reconstruction of ancestral gene orders. Models and Algorithms for Genome Evolution (MAGE 2013). (Published).
  • Belcaid M , Bergeron A , Ouangraoua A , Lavoie-Mongrain P* , Massoulier N* , Poisson G. (2012). Duplications in tape measure proteins. International conference on Research in Computational Molecular Biology (RECOMB 2012). (Published).
  • Ouangraoua A , Raffinot M. (2012). Faster and Simpler Minimal Conflicting Set Identification. LNCS 7354, 41--55. (Published).
  • Thomas A* , Ouangraoua A , Varre JS. (2012). Genome Halving by Block Interchange. ISBN 978-989-8425-90-4, 58-65. (Published).
  • Ouangraoua A , Swenson KM , Bergeron A. (2012). On the Comparison of Sets of Alternative Transcripts. LNCS 7292, 201--212. (Published).
  • Ouangraoua A , Swenson KM , Bergeron A. (2012). On the comparison of sets of alternative transcripts. International conference on Research in Computational Molecular Biology (RECOMB 2012). (Published).
  • Thomas A*, Ouangraoua A, Varré JS. (2012). Tandem Halving Problems by DCJ. LNCS 7534, 417-429. (Published).
  • Ouangraoua A, Swenson K , Chauve C. (2010). An Approximation Algorithm for Computing a Parsimonious First Speciation in the Gene Duplication Model. LNBI 6398, 290--301. (Published).
  • Ouangraoua A , Bergeron A , Swenson KM. (2010). Ultra-Perfect Sorting Scenarios. LNBI 6398, 50--61. (Published).
  • Ouangraoua A , Bergeron A. (2009). Parking Functions, Labeled Trees and {DCJ} Sorting Scenarios. LNBI 5817, 24--35. (Published).
  • Ouangraoua A , Bergeron A. (2009). Parking functions, labeled trees and DCJ sorting scenarios. International Workshop on Algorithms in Bioinformatics (WABI 2009). (Published).
  • Ouangraoua A , Boyer F , McPherson A , Tannier E , Chauve C. (2009). Prediction of Contiguous Regions in the Amniote Ancestral Genome. LNBI 5542, 173-185. (Published).
  • Ouangraoua A , Segura V , Ferraro P , Costes E. (2007). A review of plant architecture comparison methods: Application to hybrids of apple trees. Proceedings of FSPM 2007, 471-474. (Published).
  • Ouangraoua A , Chauve C. (2007). Un nouvel algorithme d’alignement de structures secondaires d’ARN. Journées Ouvertes Biologie Informatique Mathématiques (JOBIM 2007). (Published).
  • Segura V , Ouangraoua A , Ferraro P , Costes E. (2006). Comparison of tree architecture using tree edit distances: application to two-year-old apple tree. Eucarpia, biometrics in plant breeding section meeting (Eucarpia 2006). (Published).
  • Ituarte I , Ouangraoua A , Ferraro P. (2006). PyTreeMatch: a python based software for comparing RNA secondary structure. Journées Ouvertes Biologie Informatique Mathématiques (JOBIM 2006). (Published).
  • Ouangraoua A , Ferraro P. (2004). Distance multi-échelles entre structures secondaires d’ARN. Journées Ouvertes Biologie Informatique Mathématiques (JOBIM 2004). (Published).

Autres contributions

Gestion d'évènements

  • Award co-chair (Evolution and Comparative Genomics). (2023) Intelligent Systems for Molecular Biology (ISMB) 2023. (Conference).
  • PC co-chair. (2023) Great Lakes Bioinformatics Conference (GLBIO) 2023. (Conference).
  • Communication chair (Evolution and Comparative Genomics). (2021) Intelligent Systems for Molecular Biology (ISMB) 2021. (Conference).
  • PC co-chair. (2021) Great Lakes Bioinformatics Conference (GLBIO) 2021. (Conference).
  • Area co-chair (Population Genomics and Molecular Evolution). (2020) Intelligent Systems for Molecular Biology (ISMB) 2020. (Conference).
  • Abstract co-chair (Evolution and Comparative Genomics). (2019) Intelligent Systems for Molecular Biology (ISMB) 2019. (Conference).
  • Organization and PC co-chair. (2018) 16th international RECOMB Comparative Genomics conference. (Conference).